Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gli1P47806 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gli1P47806 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gli1P47806 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gli1P47806 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gli1P47806 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.68□□□□□ -0.38
Gli1P47806 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.68□□□□□ -0.38
Gli1P47806 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gli1P47806 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Mir7654-201ENSMUST00000185082 70 ntBASIC12.68□□□□□ -0.38
Gli1P47806 Gm44487-201ENSMUST00000205145 325 ntBASIC12.68□□□□□ -0.38
Gli1P47806 Gm17795-201ENSMUST00000214505 757 ntBASIC12.68□□□□□ -0.38
Gli1P47806 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gli1P47806 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gli1P47806 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gli1P47806 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Gli1P47806 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gli1P47806 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.67□□□□□ -0.38
Gli1P47806 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Gm5279-201ENSMUST00000199575 745 ntBASIC12.67□□□□□ -0.38
Gli1P47806 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.67□□□□□ -0.38
Gli1P47806 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Gli1P47806 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gli1P47806 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gli1P47806 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gli1P47806 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gli1P47806 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gli1P47806 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms