Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdh4P39038 Gm11425-201ENSMUST00000119608 498 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Gm2231-201ENSMUST00000125661 612 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdh4P39038 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.44□□□□□ -0.42
Cdh4P39038 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdh4P39038 Gm28693-202ENSMUST00000190758 331 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdh4P39038 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdh4P39038 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Gm10146-201ENSMUST00000072739 309 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Gm9396-201ENSMUST00000076703 567 ntBASIC12.44□□□□□ -0.42
Cdh4P39038 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdh4P39038 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Cdh4P39038 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdh4P39038 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh4P39038 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdh4P39038 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cdh4P39038 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Cdh4P39038 Gm16177-201ENSMUST00000120728 718 ntBASIC12.43□□□□□ -0.42
Cdh4P39038 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh4P39038 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Gm45784-201ENSMUST00000188360 142 ntBASIC12.43□□□□□ -0.42
Cdh4P39038 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh4P39038 Gm40466-201ENSMUST00000212174 422 ntBASIC12.43□□□□□ -0.42
Cdh4P39038 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.43□□□□□ -0.42
Cdh4P39038 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh4P39038 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.43□□□□□ -0.42
Cdh4P39038 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh4P39038 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Cdh4P39038 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh4P39038 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms