Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.05□□□□□ -0.48
Hoxc5P32043 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.05□□□□□ -0.48
Hoxc5P32043 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc5P32043 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Gm27437-201ENSMUST00000183429 107 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Mir6392-201ENSMUST00000184924 108 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Gm37917-201ENSMUST00000194711 392 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxc5P32043 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.04□□□□□ -0.48
Hoxc5P32043 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxc5P32043 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc5P32043 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc5P32043 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.03□□□□□ -0.48
Hoxc5P32043 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Gm18624-201ENSMUST00000220966 658 ntBASIC12.03□□□□□ -0.48
Hoxc5P32043 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.03□□□□□ -0.48
Hoxc5P32043 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc5P32043 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.03□□□□□ -0.48
Hoxc5P32043 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc5P32043 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.02□□□□□ -0.48
Hoxc5P32043 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms