Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.19□□□□□ -0.14
Pde6bP23440 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6bP23440 Gm7809-201ENSMUST00000153199 742 ntBASIC14.19□□□□□ -0.14
Pde6bP23440 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6bP23440 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.19□□□□□ -0.14
Pde6bP23440 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.19□□□□□ -0.14
Pde6bP23440 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Gm8227-201ENSMUST00000223306 571 ntBASIC14.19□□□□□ -0.14
Pde6bP23440 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pde6bP23440 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pde6bP23440 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pde6bP23440 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pde6bP23440 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pde6bP23440 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm15236-201ENSMUST00000117309 379 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Gm13297-201ENSMUST00000120205 934 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm2991-201ENSMUST00000173338 480 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Mospd4-201ENSMUST00000180618 576 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm38158-201ENSMUST00000194617 339 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pde6bP23440 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.18□□□□□ -0.14
Pde6bP23440 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pde6bP23440 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.18□□□□□ -0.14
Pde6bP23440 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6bP23440 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.17□□□□□ -0.14
Pde6bP23440 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6bP23440 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pde6bP23440 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.17□□□□□ -0.14
Pde6bP23440 Gm26083-201ENSMUST00000157904 193 ntBASIC14.17□□□□□ -0.14
Pde6bP23440 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.17□□□□□ -0.14
Pde6bP23440 Gm27320-201ENSMUST00000184892 109 ntBASIC14.17□□□□□ -0.14
Pde6bP23440 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.17□□□□□ -0.14
Pde6bP23440 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.17□□□□□ -0.14
Pde6bP23440 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pde6bP23440 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pde6bP23440 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6bP23440 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6bP23440 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
Pde6bP23440 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pde6bP23440 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pde6bP23440 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms