Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm5279-201ENSMUST00000199575 745 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
BdnfP21237 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Gm5161-201ENSMUST00000075243 853 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Gm24447-201ENSMUST00000083977 338 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
BdnfP21237 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BdnfP21237 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
BdnfP21237 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Syt7-204ENSMUST00000223586 1344 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.47□□□□□ -0.41
BdnfP21237 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Gm24694-201ENSMUST00000180054 110 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
BdnfP21237 Gm27663-201ENSMUST00000184839 110 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.47□□□□□ -0.41
BdnfP21237 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.47□□□□□ -0.41
BdnfP21237 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.47□□□□□ -0.41
BdnfP21237 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.47□□□□□ -0.41
BdnfP21237 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.47□□□□□ -0.41
BdnfP21237 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BdnfP21237 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BdnfP21237 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.46□□□□□ -0.41
BdnfP21237 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.46□□□□□ -0.41
BdnfP21237 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BdnfP21237 Gm28760-201ENSMUST00000185995 736 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Gm29608-201ENSMUST00000190444 463 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Gm19931-201ENSMUST00000198920 368 ntBASIC12.46□□□□□ -0.41
BdnfP21237 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Gm20949-201ENSMUST00000206478 952 ntBASIC12.46□□□□□ -0.41
BdnfP21237 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.46□□□□□ -0.41
BdnfP21237 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BdnfP21237 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
BdnfP21237 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BdnfP21237 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms