Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TP20293 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TP20293 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TP20293 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TP20293 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TP20293 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TP20293 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.23□□□□□ -0.45
TP20293 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.23□□□□□ -0.45
TP20293 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TP20293 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.23□□□□□ -0.45
TP20293 Gm13612-201ENSMUST00000119276 390 ntBASIC12.23□□□□□ -0.45
TP20293 Mir1894-201ENSMUST00000122802 81 ntBASIC12.23□□□□□ -0.45
TP20293 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TP20293 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.23□□□□□ -0.45
TP20293 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TP20293 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TP20293 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TP20293 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.22□□□□□ -0.45
TP20293 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.22□□□□□ -0.45
TP20293 Gm6244-201ENSMUST00000178732 841 ntBASIC12.22□□□□□ -0.45
TP20293 Mir7221-201ENSMUST00000184009 72 ntBASIC12.22□□□□□ -0.45
TP20293 Gm27892-201ENSMUST00000185017 106 ntBASIC12.22□□□□□ -0.45
TP20293 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.22□□□□□ -0.45
TP20293 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.22□□□□□ -0.45
TP20293 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.22□□□□□ -0.45
TP20293 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.22□□□□□ -0.45
TP20293 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.22□□□□□ -0.45
TP20293 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TP20293 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.22□□□□□ -0.45
TP20293 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TP20293 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TP20293 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TP20293 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.21□□□□□ -0.45
TP20293 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TP20293 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms