Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.99□□□□□ -0.01
Col1a1P11087 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.99□□□□□ -0.01
Col1a1P11087 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Gm15432-201ENSMUST00000121106 195 ntBASIC14.99□□□□□ -0.01
Col1a1P11087 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col1a1P11087 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.99□□□□□ -0.01
Col1a1P11087 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col1a1P11087 Gm28071-201ENSMUST00000190355 478 ntBASIC14.99□□□□□ -0.01
Col1a1P11087 Gm43916-201ENSMUST00000205062 967 ntBASIC14.99□□□□□ -0.01
Col1a1P11087 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.99□□□□□ -0.01
Col1a1P11087 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col1a1P11087 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.98□□□□□ -0.01
Col1a1P11087 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Col1a1P11087 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.98□□□□□ -0.01
Col1a1P11087 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col1a1P11087 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.98□□□□□ -0.01
Col1a1P11087 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.98□□□□□ -0.01
Col1a1P11087 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.98□□□□□ -0.01
Col1a1P11087 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col1a1P11087 Gm43962-201ENSMUST00000203898 190 ntBASIC14.98□□□□□ -0.01
Col1a1P11087 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.98□□□□□ -0.01
Col1a1P11087 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col1a1P11087 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col1a1P11087 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Gm23251-201ENSMUST00000103773 110 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.97□□□□□ -0.01
Col1a1P11087 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Gm43058-201ENSMUST00000197645 625 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Gm18038-201ENSMUST00000197900 485 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.97□□□□□ -0.01
Col1a1P11087 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.97□□□□□ -0.01
Col1a1P11087 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col1a1P11087 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.97□□□□□ -0.01
Col1a1P11087 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.97□□□□□ -0.01
Col1a1P11087 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col1a1P11087 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms