Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.42□□□□□ -0.58
Ccl3P10855 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl3P10855 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Ccl3P10855 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.42□□□□□ -0.58
Ccl3P10855 Gm14921-201ENSMUST00000118643 908 ntBASIC11.42□□□□□ -0.58
Ccl3P10855 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccl3P10855 Gm25732-201ENSMUST00000175168 60 ntBASIC11.42□□□□□ -0.58
Ccl3P10855 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Gm42997-202ENSMUST00000200321 985 ntBASIC11.42□□□□□ -0.58
Ccl3P10855 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.42□□□□□ -0.58
Ccl3P10855 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccl3P10855 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl3P10855 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.42□□□□□ -0.58
Ccl3P10855 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccl3P10855 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl3P10855 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl3P10855 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl3P10855 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm14263-201ENSMUST00000117955 746 ntBASIC11.41□□□□□ -0.58
Ccl3P10855 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm8018-201ENSMUST00000173536 789 ntBASIC11.41□□□□□ -0.58
Ccl3P10855 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccl3P10855 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.41□□□□□ -0.58
Ccl3P10855 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccl3P10855 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.41□□□□□ -0.58
Ccl3P10855 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ccl3P10855 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl3P10855 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.4□□□□□ -0.58
Ccl3P10855 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.4□□□□□ -0.58
Ccl3P10855 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Ccl3P10855 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl3P10855 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl3P10855 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms