Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hoxc9P09633 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hoxc9P09633 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.7■□□□□ 0.26
Hoxc9P09633 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.7■□□□□ 0.26
Hoxc9P09633 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.7■□□□□ 0.26
Hoxc9P09633 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm9083-201ENSMUST00000120423 819 ntBASIC16.7■□□□□ 0.26
Hoxc9P09633 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm24749-201ENSMUST00000157838 343 ntBASIC16.7■□□□□ 0.26
Hoxc9P09633 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.7■□□□□ 0.26
Hoxc9P09633 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc9P09633 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.69■□□□□ 0.26
Hoxc9P09633 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.69■□□□□ 0.26
Hoxc9P09633 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc9P09633 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc9P09633 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.69■□□□□ 0.26
Hoxc9P09633 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.69■□□□□ 0.26
Hoxc9P09633 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Hoxc9P09633 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc9P09633 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm12314-201ENSMUST00000118104 538 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Gm37666-201ENSMUST00000194110 866 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.68■□□□□ 0.26
Hoxc9P09633 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc9P09633 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hoxc9P09633 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc9P09633 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc9P09633 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms