Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxb3P09026 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxb3P09026 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Mir181d-201ENSMUST00000102383 72 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm14579-201ENSMUST00000117068 283 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm2231-201ENSMUST00000125661 612 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm22923-201ENSMUST00000174952 110 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxb3P09026 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm44967-201ENSMUST00000207047 631 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 AC154252.1-201ENSMUST00000226041 473 ntBASIC12.98□□□□□ -0.33
Hoxb3P09026 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxb3P09026 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxb3P09026 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.97□□□□□ -0.33
Hoxb3P09026 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.97□□□□□ -0.33
Hoxb3P09026 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Gm10179-201ENSMUST00000086233 688 ntBASIC12.97□□□□□ -0.33
Hoxb3P09026 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Hoxb3P09026 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxb3P09026 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxb3P09026 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.96□□□□□ -0.33
Hoxb3P09026 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxb3P09026 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxb3P09026 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.96□□□□□ -0.33
Hoxb3P09026 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.96□□□□□ -0.33
Hoxb3P09026 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxb3P09026 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.96□□□□□ -0.33
Hoxb3P09026 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxb3P09026 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms