Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.35□□□□□ -0.27
Syn1O88935 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Syn1O88935 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.35□□□□□ -0.27
Syn1O88935 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.35□□□□□ -0.27
Syn1O88935 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.35□□□□□ -0.27
Syn1O88935 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Syn1O88935 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.35□□□□□ -0.27
Syn1O88935 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
Syn1O88935 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Syn1O88935 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.34□□□□□ -0.27
Syn1O88935 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Syn1O88935 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Gm12029-201ENSMUST00000120073 832 ntBASIC13.34□□□□□ -0.27
Syn1O88935 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.34□□□□□ -0.27
Syn1O88935 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.34□□□□□ -0.27
Syn1O88935 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Syn1O88935 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Syn1O88935 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.34□□□□□ -0.27
Syn1O88935 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Syn1O88935 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syn1O88935 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Syn1O88935 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Syn1O88935 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Syn1O88935 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Syn1O88935 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Syn1O88935 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Syn1O88935 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.33□□□□□ -0.28
Syn1O88935 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Syn1O88935 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syn1O88935 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.33□□□□□ -0.28
Syn1O88935 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Gm18734-201ENSMUST00000172937 808 ntBASIC13.33□□□□□ -0.28
Syn1O88935 Gm29155-201ENSMUST00000185910 269 ntBASIC13.33□□□□□ -0.28
Syn1O88935 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.33□□□□□ -0.28
Syn1O88935 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.33□□□□□ -0.28
Syn1O88935 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.33□□□□□ -0.28
Syn1O88935 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syn1O88935 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syn1O88935 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Syn1O88935 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syn1O88935 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.33□□□□□ -0.28
Syn1O88935 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Syn1O88935 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms