Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.44□□□□□ -0.42
Hcn1O88704 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hcn1O88704 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.44□□□□□ -0.42
Hcn1O88704 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Hcn1O88704 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hcn1O88704 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Hcn1O88704 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Gm12928-201ENSMUST00000117115 573 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hcn1O88704 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Gm29608-201ENSMUST00000190444 463 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Hcn1O88704 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.44□□□□□ -0.42
Hcn1O88704 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hcn1O88704 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hcn1O88704 Gm5356-201ENSMUST00000093326 615 ntBASIC12.44□□□□□ -0.42
Hcn1O88704 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hcn1O88704 Matn2-203ENSMUST00000226766 3252 ntBASIC12.43□□□□□ -0.42
Hcn1O88704 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.43□□□□□ -0.42
Hcn1O88704 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.43□□□□□ -0.42
Hcn1O88704 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Gm38144-201ENSMUST00000192790 465 ntBASIC12.43□□□□□ -0.42
Hcn1O88704 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.43□□□□□ -0.42
Hcn1O88704 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.43□□□□□ -0.42
Hcn1O88704 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hcn1O88704 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hcn1O88704 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.43□□□□□ -0.42
Hcn1O88704 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.42□□□□□ -0.42
Hcn1O88704 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hcn1O88704 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hcn1O88704 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hcn1O88704 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.42□□□□□ -0.42
Hcn1O88704 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.42□□□□□ -0.42
Hcn1O88704 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hcn1O88704 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.42□□□□□ -0.42
Hcn1O88704 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hcn1O88704 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Gm27892-201ENSMUST00000185017 106 ntBASIC12.42□□□□□ -0.42
Hcn1O88704 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms