Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr1O70481 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.5■□□□□ 0.23
Ubr1O70481 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ubr1O70481 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ubr1O70481 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubr1O70481 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ubr1O70481 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Gm15711-201ENSMUST00000118889 535 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Gm13408-201ENSMUST00000119822 798 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubr1O70481 Gm11450-201ENSMUST00000121144 333 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Gm13935-201ENSMUST00000121859 798 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Gm5051-201ENSMUST00000204085 485 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.5■□□□□ 0.23
Ubr1O70481 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubr1O70481 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Ubr1O70481 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr1O70481 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm11941-201ENSMUST00000119904 610 ntBASIC16.49■□□□□ 0.23
Ubr1O70481 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.49■□□□□ 0.23
Ubr1O70481 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm5455-201ENSMUST00000058710 715 ntBASIC16.49■□□□□ 0.23
Ubr1O70481 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubr1O70481 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ubr1O70481 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ubr1O70481 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Ubr1O70481 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.49■□□□□ 0.23
Ubr1O70481 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubr1O70481 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr1O70481 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ubr1O70481 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubr1O70481 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.48■□□□□ 0.23
Ubr1O70481 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ubr1O70481 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubr1O70481 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.48■□□□□ 0.23
Ubr1O70481 Gm270-201ENSMUST00000223010 976 ntBASIC16.48■□□□□ 0.23
Ubr1O70481 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.48■□□□□ 0.23
Ubr1O70481 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr1O70481 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ubr1O70481 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubr1O70481 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr1O70481 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms