Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl13O55038 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.96□□□□□ -0.65
Cxcl13O55038 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.96□□□□□ -0.65
Cxcl13O55038 Gm12291-201ENSMUST00000121627 311 ntBASIC10.96□□□□□ -0.65
Cxcl13O55038 Gm14381-201ENSMUST00000122105 414 ntBASIC10.96□□□□□ -0.65
Cxcl13O55038 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cxcl13O55038 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.96□□□□□ -0.65
Cxcl13O55038 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.96□□□□□ -0.65
Cxcl13O55038 Gm21769-201ENSMUST00000211922 111 ntBASIC10.96□□□□□ -0.65
Cxcl13O55038 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.96□□□□□ -0.65
Cxcl13O55038 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.96□□□□□ -0.65
Cxcl13O55038 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cxcl13O55038 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Cxcl13O55038 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cxcl13O55038 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cxcl13O55038 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cxcl13O55038 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm13492-201ENSMUST00000119772 665 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm11964-201ENSMUST00000120982 444 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm24526-201ENSMUST00000082921 158 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.95□□□□□ -0.66
Cxcl13O55038 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cxcl13O55038 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cxcl13O55038 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms