Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Smarce1O54941 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smarce1O54941 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.42■□□□□ 0.06
Smarce1O54941 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarce1O54941 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
Smarce1O54941 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Smarce1O54941 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarce1O54941 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smarce1O54941 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Gm15920-201ENSMUST00000118998 402 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Smarce1O54941 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Smarce1O54941 Mir7023-201ENSMUST00000185093 64 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Gm6983-201ENSMUST00000214912 628 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.41■□□□□ 0.06
Smarce1O54941 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Itm2b-204ENSMUST00000228637 783 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Gm5867-201ENSMUST00000063197 592 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Smarce1O54941 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.41■□□□□ 0.06
Smarce1O54941 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smarce1O54941 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarce1O54941 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarce1O54941 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm16202-201ENSMUST00000117532 544 ntBASIC15.4■□□□□ 0.06
Smarce1O54941 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm18307-201ENSMUST00000206864 949 ntBASIC15.4■□□□□ 0.06
Smarce1O54941 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.4■□□□□ 0.06
Smarce1O54941 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
Smarce1O54941 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Smarce1O54941 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.4■□□□□ 0.06
Smarce1O54941 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarce1O54941 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.4■□□□□ 0.06
Smarce1O54941 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Smarce1O54941 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.39■□□□□ 0.05
Smarce1O54941 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarce1O54941 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms