Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
FxnO35943 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
FxnO35943 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.18□□□□□ -0.46
FxnO35943 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Gm18307-201ENSMUST00000206864 949 ntBASIC12.18□□□□□ -0.46
FxnO35943 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.18□□□□□ -0.46
FxnO35943 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.18□□□□□ -0.46
FxnO35943 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FxnO35943 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
FxnO35943 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.18□□□□□ -0.46
FxnO35943 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.17□□□□□ -0.46
FxnO35943 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.17□□□□□ -0.46
FxnO35943 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
FxnO35943 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.17□□□□□ -0.46
FxnO35943 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.17□□□□□ -0.46
FxnO35943 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.17□□□□□ -0.46
FxnO35943 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.17□□□□□ -0.46
FxnO35943 Gm6218-201ENSMUST00000219812 628 ntBASIC12.17□□□□□ -0.46
FxnO35943 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.17□□□□□ -0.46
FxnO35943 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.17□□□□□ -0.46
FxnO35943 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.17□□□□□ -0.46
FxnO35943 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.17□□□□□ -0.46
FxnO35943 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FxnO35943 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.16□□□□□ -0.46
FxnO35943 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FxnO35943 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.16□□□□□ -0.46
FxnO35943 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.16□□□□□ -0.46
FxnO35943 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.16□□□□□ -0.46
FxnO35943 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.16□□□□□ -0.46
FxnO35943 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
FxnO35943 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FxnO35943 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.16□□□□□ -0.46
FxnO35943 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FxnO35943 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Gm12341-201ENSMUST00000119724 503 ntBASIC12.16□□□□□ -0.46
FxnO35943 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FxnO35943 Gm29608-201ENSMUST00000190444 463 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms