Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Paupar-201ENSMUST00000194826 3482 ntBASIC10.27□□□□□ -0.76
Efnb3O35393 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Efnb3O35393 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Efnb3O35393 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.27□□□□□ -0.76
Efnb3O35393 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.27□□□□□ -0.77
Efnb3O35393 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.27□□□□□ -0.77
Efnb3O35393 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm27321-201ENSMUST00000185021 205 ntBASIC10.27□□□□□ -0.77
Efnb3O35393 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.27□□□□□ -0.77
Efnb3O35393 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.27□□□□□ -0.77
Efnb3O35393 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.27□□□□□ -0.77
Efnb3O35393 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.27□□□□□ -0.77
Efnb3O35393 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.27□□□□□ -0.77
Efnb3O35393 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Efnb3O35393 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Efnb3O35393 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Efnb3O35393 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Efnb3O35393 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.26□□□□□ -0.77
Efnb3O35393 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Efnb3O35393 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Gm13223-201ENSMUST00000118609 747 ntBASIC10.26□□□□□ -0.77
Efnb3O35393 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.26□□□□□ -0.77
Efnb3O35393 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Efnb3O35393 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Efnb3O35393 Gm10576-201ENSMUST00000191927 825 ntBASIC10.26□□□□□ -0.77
Efnb3O35393 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Efnb3O35393 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Efnb3O35393 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.26□□□□□ -0.77
Efnb3O35393 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.26□□□□□ -0.77
Efnb3O35393 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms