Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ube3aO08759 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ube3aO08759 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.03□□□□□ -0.16
Ube3aO08759 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.03□□□□□ -0.16
Ube3aO08759 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.03□□□□□ -0.16
Ube3aO08759 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ube3aO08759 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.03□□□□□ -0.16
Ube3aO08759 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ube3aO08759 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.03□□□□□ -0.16
Ube3aO08759 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ube3aO08759 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ube3aO08759 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ube3aO08759 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.02□□□□□ -0.16
Ube3aO08759 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ube3aO08759 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.02□□□□□ -0.17
Ube3aO08759 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ube3aO08759 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ube3aO08759 Gm29608-201ENSMUST00000190444 463 ntBASIC14.02□□□□□ -0.17
Ube3aO08759 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ube3aO08759 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3aO08759 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.01□□□□□ -0.17
Ube3aO08759 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.01□□□□□ -0.17
Ube3aO08759 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3aO08759 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.01□□□□□ -0.17
Ube3aO08759 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.01□□□□□ -0.17
Ube3aO08759 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3aO08759 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Ube3aO08759 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3aO08759 Gm7775-201ENSMUST00000218871 853 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms