Protein–RNA interactions for Protein: F8VQC1

Srp72, Signal recognition particle subunit SRP72, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp72F8VQC1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 Gm38223-201ENSMUST00000194484 695 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.74□□□□□ -0.37
Srp72F8VQC1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Srp72F8VQC1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm42612-201ENSMUST00000197986 623 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm43170-201ENSMUST00000199827 612 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm19220-201ENSMUST00000222682 803 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.73□□□□□ -0.37
Srp72F8VQC1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Srp72F8VQC1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms