Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.33□□□□□ -0.28
Atf6F6VAN0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.33□□□□□ -0.28
Atf6F6VAN0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.33□□□□□ -0.28
Atf6F6VAN0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf6F6VAN0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Proscos-202ENSMUST00000178990 666 ntBASIC13.32□□□□□ -0.28
Atf6F6VAN0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gm9794-201ENSMUST00000202370 423 ntBASIC13.32□□□□□ -0.28
Atf6F6VAN0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Atf6F6VAN0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf6F6VAN0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Gm11618-201ENSMUST00000117946 267 ntBASIC13.31□□□□□ -0.28
Atf6F6VAN0 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.31□□□□□ -0.28
Atf6F6VAN0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Gm5356-201ENSMUST00000093326 615 ntBASIC13.31□□□□□ -0.28
Atf6F6VAN0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf6F6VAN0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms