Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gm23119-201ENSMUST00000158610 140 ntBASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gm9463-201ENSMUST00000206707 601 ntBASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hfm1D3Z4R1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gm24934-201ENSMUST00000103764 111 ntBASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gm16397-201ENSMUST00000122201 494 ntBASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gm38210-201ENSMUST00000191944 809 ntBASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hfm1D3Z4R1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 CT025551.1-201ENSMUST00000223996 692 ntBASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hfm1D3Z4R1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm21998-201ENSMUST00000117552 1308 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm13142-201ENSMUST00000117213 1453 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm12795-201ENSMUST00000117594 539 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm23085-201ENSMUST00000157849 293 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm18304-201ENSMUST00000189162 546 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm5455-201ENSMUST00000058710 715 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.88■□□□□ 0.45
Hfm1D3Z4R1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hfm1D3Z4R1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms