Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.39□□□□□ -0.11
Brpf3B2KF05 Gm43094-201ENSMUST00000196549 921 ntBASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.39□□□□□ -0.11
Brpf3B2KF05 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brpf3B2KF05 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.39□□□□□ -0.11
Brpf3B2KF05 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.38□□□□□ -0.11
Brpf3B2KF05 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm43514-201ENSMUST00000198852 424 ntBASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm6888-201ENSMUST00000221983 706 ntBASIC14.38□□□□□ -0.11
Brpf3B2KF05 Chchd1-203ENSMUST00000224633 557 ntBASIC14.38□□□□□ -0.11
Brpf3B2KF05 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.38□□□□□ -0.11
Brpf3B2KF05 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brpf3B2KF05 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Gm5312-201ENSMUST00000203728 547 ntBASIC14.37□□□□□ -0.11
Brpf3B2KF05 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brpf3B2KF05 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.37□□□□□ -0.11
Brpf3B2KF05 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms