Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm22133-201ENSMUST00000102082 109 ntBASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm1821-202ENSMUST00000227415 750 ntBASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col4a6B1AVK5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.06□□□□□ -0.32
Col4a6B1AVK5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Ginm1-202ENSMUST00000065124 300 ntBASIC13.06□□□□□ -0.32
Col4a6B1AVK5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col4a6B1AVK5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Gm37246-201ENSMUST00000192665 835 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Gm23596-201ENSMUST00000104304 132 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Gm10731-201ENSMUST00000181171 448 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms