Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.97□□□□□ -0.33
Gm3854A0A1B0GSS6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3854A0A1B0GSS6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3854A0A1B0GSS6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3854A0A1B0GSS6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm13492-201ENSMUST00000119772 665 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm13875-201ENSMUST00000120162 282 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm14277-201ENSMUST00000121195 360 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm27341-201ENSMUST00000183570 106 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm38317-201ENSMUST00000195564 343 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm3854A0A1B0GSS6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.96□□□□□ -0.34
Gm3854A0A1B0GSS6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm11930-201ENSMUST00000117788 190 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm15547-201ENSMUST00000122152 333 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Mir3547-201ENSMUST00000175461 88 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3854A0A1B0GSS6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm3854A0A1B0GSS6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms