Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.78□□□□□ -0.68
Trbv29A0A0G2LB96 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trbv29A0A0G2LB96 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trbv29A0A0G2LB96 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trbv29A0A0G2LB96 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trbv29A0A0G2LB96 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trbv29A0A0G2LB96 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm29667-201ENSMUST00000190817 490 ntBASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trbv29A0A0G2LB96 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gm27838-201ENSMUST00000184829 128 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gm37935-201ENSMUST00000192012 982 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gm38223-201ENSMUST00000194484 695 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.76□□□□□ -0.69
Trbv29A0A0G2LB96 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms