Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav6n-6A0A075B6B2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm12428-201ENSMUST00000119844 727 ntBASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm38294-201ENSMUST00000192831 381 ntBASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm7775-201ENSMUST00000218871 853 ntBASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav6n-6A0A075B6B2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Daam2-202ENSMUST00000224595 1926 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm44719-201ENSMUST00000206404 149 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm20949-201ENSMUST00000206478 952 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav6n-6A0A075B6B2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms