Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CcsQ9WU84 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CcsQ9WU84 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm24543-201ENSMUST00000103867 82 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm15653-201ENSMUST00000119247 907 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm6222-201ENSMUST00000120787 396 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm17837-201ENSMUST00000186435 985 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm6888-201ENSMUST00000221983 706 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.12□□□□□ -0.79
CcsQ9WU84 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.12□□□□□ -0.79
CcsQ9WU84 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CcsQ9WU84 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.11□□□□□ -0.79
CcsQ9WU84 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.11□□□□□ -0.79
CcsQ9WU84 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Mir7684-201ENSMUST00000183858 60 ntBASIC10.11□□□□□ -0.79
CcsQ9WU84 Mir8102-201ENSMUST00000184148 139 ntBASIC10.11□□□□□ -0.79
CcsQ9WU84 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CcsQ9WU84 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CcsQ9WU84 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms