Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Gm17376-201ENSMUST00000166016 84 ntBASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Morn2-202ENSMUST00000227729 656 ntBASIC14.07□□□□□ -0.16
Trim54Q9ERP3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim54Q9ERP3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm13316-201ENSMUST00000140537 691 ntBASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim54Q9ERP3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.05□□□□□ -0.16
Trim54Q9ERP3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms