Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.54□□□□□ -0.24
Cpne8Q9DC53 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Gm8805-201ENSMUST00000117848 313 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Gm13123-201ENSMUST00000122173 492 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne8Q9DC53 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne8Q9DC53 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm13612-201ENSMUST00000119276 390 ntBASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm28693-202ENSMUST00000190758 331 ntBASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.52□□□□□ -0.25
Cpne8Q9DC53 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne8Q9DC53 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne8Q9DC53 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms