Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Chmp2aQ9DB34 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2aQ9DB34 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm27331-201ENSMUST00000183705 60 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Mir7221-201ENSMUST00000184009 72 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm37922-201ENSMUST00000195596 455 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm29705-201ENSMUST00000212598 474 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2aQ9DB34 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms