Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sf3a3Q9D554 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sf3a3Q9D554 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sf3a3Q9D554 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.14□□□□□ -0.31
Sf3a3Q9D554 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3a3Q9D554 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gm45841-201ENSMUST00000207700 164 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sf3a3Q9D554 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Gm15770-201ENSMUST00000117498 584 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Gm11745-201ENSMUST00000121669 448 ntBASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sf3a3Q9D554 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms