Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd3Q99LE3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd3Q99LE3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.48□□□□□ -0.25
Lysmd3Q99LE3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms