Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.03■□□□□ -0
Smc1bQ920F6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smc1bQ920F6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.02■□□□□ -0
Smc1bQ920F6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm12176-201ENSMUST00000121420 875 ntBASIC15.02■□□□□ -0
Smc1bQ920F6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm7029-201ENSMUST00000173226 450 ntBASIC15.02■□□□□ -0
Smc1bQ920F6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.02■□□□□ -0
Smc1bQ920F6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.02■□□□□ -0
Smc1bQ920F6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.02■□□□□ -0
Smc1bQ920F6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Smc1bQ920F6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.02■□□□□ -0
Smc1bQ920F6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1bQ920F6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Smc1bQ920F6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.02□□□□□ -0.01
Smc1bQ920F6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Smc1bQ920F6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm13297-201ENSMUST00000120205 934 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm26315-201ENSMUST00000083890 321 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.01□□□□□ -0.01
Smc1bQ920F6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Smc1bQ920F6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15□□□□□ -0.01
Smc1bQ920F6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15□□□□□ -0.01
Smc1bQ920F6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Gm3809-201ENSMUST00000180973 1006 ntBASIC15□□□□□ -0.01
Smc1bQ920F6 Gm37489-201ENSMUST00000191883 159 ntBASIC15□□□□□ -0.01
Smc1bQ920F6 Rps4l-202ENSMUST00000204242 789 ntBASIC15□□□□□ -0.01
Smc1bQ920F6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15□□□□□ -0.01
Smc1bQ920F6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Gm10146-201ENSMUST00000072739 309 ntBASIC15□□□□□ -0.01
Smc1bQ920F6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15□□□□□ -0.01
Smc1bQ920F6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smc1bQ920F6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1bQ920F6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms