Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm16479-201ENSMUST00000121706 932 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm27486-201ENSMUST00000184923 80 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm7653-201ENSMUST00000214567 508 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb6Q91XZ4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb6Q91XZ4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm22331-201ENSMUST00000158066 136 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm7561-201ENSMUST00000211203 886 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb6Q91XZ4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms