Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trex1Q91XB0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.84□□□□□ -0.03
Trex1Q91XB0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Mir339-201ENSMUST00000083659 96 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.84□□□□□ -0.03
Trex1Q91XB0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trex1Q91XB0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.83□□□□□ -0.03
Trex1Q91XB0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.83□□□□□ -0.03
Trex1Q91XB0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Gm11930-201ENSMUST00000117788 190 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Mir5132-201ENSMUST00000175166 71 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.83□□□□□ -0.04
Trex1Q91XB0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trex1Q91XB0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm13736-201ENSMUST00000119272 253 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm15547-201ENSMUST00000122152 333 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm15276-201ENSMUST00000145953 498 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm16505-201ENSMUST00000179981 232 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms