Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Gm34023-201ENSMUST00000195539 217 ntBASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx54Q8K4L0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm25880-201ENSMUST00000104331 132 ntBASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm25072-201ENSMUST00000175233 235 ntBASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm8492-201ENSMUST00000182375 987 ntBASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx54Q8K4L0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Gm5616-201ENSMUST00000165252 384 ntBASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Gm8741-201ENSMUST00000174736 384 ntBASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 AC154176.1-201ENSMUST00000225897 220 ntBASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx54Q8K4L0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx54Q8K4L0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms