Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.18□□□□□ -0.46
Cfap54Q8C6S9 Gm11801-201ENSMUST00000117807 746 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm25951-201ENSMUST00000175330 64 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm27530-201ENSMUST00000184096 98 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Snora73b-201ENSMUST00000083419 205 ntBASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cfap54Q8C6S9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Mir7076-201ENSMUST00000183519 74 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm27627-201ENSMUST00000183644 150 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Mir7686-201ENSMUST00000200604 57 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm13888-201ENSMUST00000119148 422 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.16□□□□□ -0.46
Cfap54Q8C6S9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cfap54Q8C6S9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms