Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm22121-201ENSMUST00000175148 54 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim47Q8C0E3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim47Q8C0E3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Gm14704-201ENSMUST00000120300 874 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms