Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scfd1Q8BRF7 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.82□□□□□ -0.04
Scfd1Q8BRF7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scfd1Q8BRF7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scfd1Q8BRF7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scfd1Q8BRF7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scfd1Q8BRF7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm11531-201ENSMUST00000117614 555 ntBASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm15808-201ENSMUST00000119046 604 ntBASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm5950-201ENSMUST00000213337 772 ntBASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm6082-201ENSMUST00000215204 454 ntBASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scfd1Q8BRF7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm15236-201ENSMUST00000117309 379 ntBASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scfd1Q8BRF7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms