Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rd3Q8BRE0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rd3Q8BRE0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm14704-201ENSMUST00000120300 874 ntBASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rd3Q8BRE0 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.74□□□□□ -0.21
Rd3Q8BRE0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Gm12997-201ENSMUST00000120207 640 ntBASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.74□□□□□ -0.21
Rd3Q8BRE0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms