Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Gm16505-201ENSMUST00000179981 232 ntBASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcal1Q8BJL0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm23270-201ENSMUST00000104055 131 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm13665-201ENSMUST00000120830 528 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm38092-201ENSMUST00000195600 653 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm45186-201ENSMUST00000206874 478 ntBASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcal1Q8BJL0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm14130-201ENSMUST00000118417 987 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm12291-201ENSMUST00000121627 311 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm15547-201ENSMUST00000122152 333 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Rps4l-202ENSMUST00000204242 789 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Daam2-202ENSMUST00000224595 1926 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcal1Q8BJL0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms