Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm37497-201ENSMUST00000195830 798 ntBASIC10.67□□□□□ -0.7
Sox21Q811W0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Gm19309-201ENSMUST00000218295 205 ntBASIC10.67□□□□□ -0.7
Sox21Q811W0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox21Q811W0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Sox21Q811W0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox21Q811W0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Sox21Q811W0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox21Q811W0 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.67□□□□□ -0.7
Sox21Q811W0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox21Q811W0 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.67□□□□□ -0.7
Sox21Q811W0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.66□□□□□ -0.7
Sox21Q811W0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm11618-201ENSMUST00000117946 267 ntBASIC10.66□□□□□ -0.7
Sox21Q811W0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Gm37922-201ENSMUST00000195596 455 ntBASIC10.66□□□□□ -0.7
Sox21Q811W0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.66□□□□□ -0.7
Sox21Q811W0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.66□□□□□ -0.7
Sox21Q811W0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sox21Q811W0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sox21Q811W0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox21Q811W0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Grk6-205ENSMUST00000224653 2976 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.65□□□□□ -0.7
Sox21Q811W0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm25261-201ENSMUST00000157416 134 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox21Q811W0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox21Q811W0 Gm6222-202ENSMUST00000182143 629 ntBASIC10.65□□□□□ -0.7
Sox21Q811W0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms