Protein–RNA interactions for Protein: Q810N9

Ccdc172, Coiled-coil domain-containing protein 172, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc172Q810N9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Gm10146-201ENSMUST00000072739 309 ntBASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc172Q810N9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gm11637-201ENSMUST00000120601 592 ntBASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gm16177-201ENSMUST00000120728 718 ntBASIC14.79□□□□□ -0.04
Ccdc172Q810N9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc172Q810N9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Mir686-201ENSMUST00000102174 109 ntBASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gm43818-201ENSMUST00000200605 466 ntBASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc172Q810N9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc172Q810N9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc172Q810N9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc172Q810N9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms