Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm23119-201ENSMUST00000158610 140 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm45594-201ENSMUST00000211717 241 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm19009-201ENSMUST00000223072 823 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm11509-201ENSMUST00000117358 325 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm43184-201ENSMUST00000197247 542 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm45500-201ENSMUST00000211676 803 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr5Q80TP3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm22877-201ENSMUST00000175451 105 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm5100-201ENSMUST00000195631 589 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm18463-201ENSMUST00000207258 474 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Ubr5Q80TP3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr5Q80TP3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr5Q80TP3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr5Q80TP3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms