Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gm13875-201ENSMUST00000120162 282 ntBASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gm45186-201ENSMUST00000206874 478 ntBASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smchd1Q6P5D8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm18056-201ENSMUST00000207670 568 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm18061-201ENSMUST00000208350 562 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm18063-201ENSMUST00000208529 568 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm18052-201ENSMUST00000208750 559 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm11531-201ENSMUST00000117614 555 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm20482-202ENSMUST00000174729 825 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm27320-201ENSMUST00000184892 109 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smchd1Q6P5D8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smchd1Q6P5D8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smchd1Q6P5D8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smchd1Q6P5D8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smchd1Q6P5D8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smchd1Q6P5D8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms