Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VclQ64727 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.8□□□□□ -0.36
VclQ64727 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.8□□□□□ -0.36
VclQ64727 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.8□□□□□ -0.36
VclQ64727 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Gm13123-201ENSMUST00000122173 492 ntBASIC12.8□□□□□ -0.36
VclQ64727 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.8□□□□□ -0.36
VclQ64727 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.8□□□□□ -0.36
VclQ64727 Snora78-201ENSMUST00000158630 128 ntBASIC12.8□□□□□ -0.36
VclQ64727 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.8□□□□□ -0.36
VclQ64727 AY702102-202ENSMUST00000194651 1173 ntBASIC12.8□□□□□ -0.36
VclQ64727 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Gm10146-201ENSMUST00000072739 309 ntBASIC12.8□□□□□ -0.36
VclQ64727 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.8□□□□□ -0.36
VclQ64727 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.8□□□□□ -0.36
VclQ64727 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.8□□□□□ -0.36
VclQ64727 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VclQ64727 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.79□□□□□ -0.36
VclQ64727 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VclQ64727 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Gm14660-201ENSMUST00000119809 575 ntBASIC12.79□□□□□ -0.36
VclQ64727 Gm11637-201ENSMUST00000120601 592 ntBASIC12.79□□□□□ -0.36
VclQ64727 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Gm26185-201ENSMUST00000157692 266 ntBASIC12.79□□□□□ -0.36
VclQ64727 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.79□□□□□ -0.36
VclQ64727 Gm28693-202ENSMUST00000190758 331 ntBASIC12.79□□□□□ -0.36
VclQ64727 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VclQ64727 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VclQ64727 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VclQ64727 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.79□□□□□ -0.36
VclQ64727 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.79□□□□□ -0.36
VclQ64727 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VclQ64727 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
VclQ64727 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VclQ64727 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms