Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gm4986-201ENSMUST00000119731 549 ntBASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gm38092-201ENSMUST00000195600 653 ntBASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rc3h1Q4VGL6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm8798-201ENSMUST00000211877 1661 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm37644-201ENSMUST00000192190 2270 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm44891-201ENSMUST00000208817 2223 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm5637-201ENSMUST00000153890 1119 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm37489-201ENSMUST00000191883 159 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm43416-201ENSMUST00000201916 1015 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gm9257-201ENSMUST00000221254 232 ntBASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rc3h1Q4VGL6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.99□□□□□ -0.01
Rc3h1Q4VGL6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms