Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm43947-201ENSMUST00000203019 959 ntBASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gm11978-201ENSMUST00000122315 466 ntBASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gm5950-201ENSMUST00000213337 772 ntBASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.14■□□□□ 0.01
Ddx49Q4FZF3 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Gm14208-201ENSMUST00000119645 678 ntBASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx49Q4FZF3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm2546-201ENSMUST00000182630 991 ntBASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ddx49Q4FZF3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms