Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Gm5950-201ENSMUST00000213337 772 ntBASIC14.06□□□□□ -0.16
Col9a2Q07643 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.06□□□□□ -0.16
Col9a2Q07643 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.06□□□□□ -0.16
Col9a2Q07643 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.05□□□□□ -0.16
Col9a2Q07643 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.05□□□□□ -0.16
Col9a2Q07643 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Gm6082-201ENSMUST00000215204 454 ntBASIC14.05□□□□□ -0.16
Col9a2Q07643 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Mir339-201ENSMUST00000083659 96 ntBASIC14.05□□□□□ -0.16
Col9a2Q07643 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.05□□□□□ -0.16
Col9a2Q07643 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.05□□□□□ -0.16
Col9a2Q07643 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col9a2Q07643 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm12291-201ENSMUST00000121627 311 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm26083-201ENSMUST00000157904 193 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm16296-201ENSMUST00000159905 325 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.04□□□□□ -0.16
Col9a2Q07643 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a2Q07643 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.03□□□□□ -0.16
Col9a2Q07643 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm13461-201ENSMUST00000120980 662 ntBASIC14.03□□□□□ -0.16
Col9a2Q07643 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms