Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sox4Q06831 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox4Q06831 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Gm12957-201ENSMUST00000117835 377 ntBASIC12.79□□□□□ -0.36
Sox4Q06831 Gm12363-201ENSMUST00000122250 668 ntBASIC12.79□□□□□ -0.36
Sox4Q06831 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.79□□□□□ -0.36
Sox4Q06831 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox4Q06831 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.79□□□□□ -0.36
Sox4Q06831 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.79□□□□□ -0.36
Sox4Q06831 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox4Q06831 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox4Q06831 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox4Q06831 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm17208-201ENSMUST00000168388 535 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Gm37042-201ENSMUST00000193816 581 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox4Q06831 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm19163-201ENSMUST00000223313 780 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.78□□□□□ -0.36
Sox4Q06831 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sox4Q06831 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox4Q06831 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox4Q06831 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Sox4Q06831 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.77□□□□□ -0.36
Sox4Q06831 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sox4Q06831 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox4Q06831 Gm23931-201ENSMUST00000103842 109 ntBASIC12.77□□□□□ -0.37
Sox4Q06831 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox4Q06831 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox4Q06831 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms